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microarray expression profiling datasets  (Biotechnology Information)

 
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    Biotechnology Information microarray expression profiling datasets
    Microarray Expression Profiling Datasets, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+expression+profile+datasets/microarray+data/pm39707785-44-49-39
    Average 90 stars, based on 1 article reviews
    microarray expression profiling datasets - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: Investigation of hypoxia networks in ovarian cancer via bioinformatics analysis
    Article Snippet: .. The microarray expression profile datasets (GEO access number: GSE53012), contributed by Olbryt et al. [ ], were downloaded from the National Center of Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database ( http://www.ncbi.nlm.nih.gov/geo/ ), which was currently the largest fully public gene expression resource [ ]. ..

    Article Title: Identification of diagnostic biomarkers in Alzheimer’s disease by integrated bioinformatic analysis and machine learning strategies
    Article Snippet: .. We retrieved and downloaded six microarray expression profile datasets with the frontal cortex of AD patients from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database. .. The search was conducted with the following keywords: (“Alzheimer’s disease” and “Expression profiling by array”), and the species was restricted as “Homo sapiens.” Four datasets (GSE5281, GSE131617, GSE48350, and GSE84422) from the platform of Affymetrix are used as experimental datasets, and another two datasets (GSE33000 and GSE44772) from the platform of Rosetta/Merck were used as validation datasets.

    Article Title: Identification of circRNA-miRNA-mRNA regulatory network and its role in cardiac hypertrophy.
    Article Snippet: .. Expression profile data and quality assessment First, three microarray expression profile datasets from the National Center for Biotechnology Information were selected. .. Based on the mRNA expression microarray data of GPL15389, Illumina HumanHT-12 V3.0 expression bead chip, GSE36961 contained 145 samples (106 HCM samples and 39 control samples).

    Article Title: Identification of circRNA-miRNA-mRNA regulatory network and its role in cardiac hypertrophy
    Article Snippet: .. First, three microarray expression profile datasets from the National Center for Biotechnology Information were selected. .. Based on the mRNA expression microarray data of GPL15389, Illumina HumanHT-12 V3.0 expression bead chip, GSE36961 contained 145 samples (106 HCM samples and 39 control samples).

    Expressing:

    Article Title: Investigation of hypoxia networks in ovarian cancer via bioinformatics analysis
    Article Snippet: .. The microarray expression profile datasets (GEO access number: GSE53012), contributed by Olbryt et al. [ ], were downloaded from the National Center of Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database ( http://www.ncbi.nlm.nih.gov/geo/ ), which was currently the largest fully public gene expression resource [ ]. ..

    Article Title: Identification of diagnostic biomarkers in Alzheimer’s disease by integrated bioinformatic analysis and machine learning strategies
    Article Snippet: .. We retrieved and downloaded six microarray expression profile datasets with the frontal cortex of AD patients from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database. .. The search was conducted with the following keywords: (“Alzheimer’s disease” and “Expression profiling by array”), and the species was restricted as “Homo sapiens.” Four datasets (GSE5281, GSE131617, GSE48350, and GSE84422) from the platform of Affymetrix are used as experimental datasets, and another two datasets (GSE33000 and GSE44772) from the platform of Rosetta/Merck were used as validation datasets.

    Article Title: Identification of circRNA-miRNA-mRNA regulatory network and its role in cardiac hypertrophy.
    Article Snippet: .. Expression profile data and quality assessment First, three microarray expression profile datasets from the National Center for Biotechnology Information were selected. .. Based on the mRNA expression microarray data of GPL15389, Illumina HumanHT-12 V3.0 expression bead chip, GSE36961 contained 145 samples (106 HCM samples and 39 control samples).

    Article Title: Identification of circRNA-miRNA-mRNA regulatory network and its role in cardiac hypertrophy
    Article Snippet: .. First, three microarray expression profile datasets from the National Center for Biotechnology Information were selected. .. Based on the mRNA expression microarray data of GPL15389, Illumina HumanHT-12 V3.0 expression bead chip, GSE36961 contained 145 samples (106 HCM samples and 39 control samples).

    Gene Expression:

    Article Title: Investigation of hypoxia networks in ovarian cancer via bioinformatics analysis
    Article Snippet: .. The microarray expression profile datasets (GEO access number: GSE53012), contributed by Olbryt et al. [ ], were downloaded from the National Center of Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database ( http://www.ncbi.nlm.nih.gov/geo/ ), which was currently the largest fully public gene expression resource [ ]. ..

    Article Title: Identification of diagnostic biomarkers in Alzheimer’s disease by integrated bioinformatic analysis and machine learning strategies
    Article Snippet: .. We retrieved and downloaded six microarray expression profile datasets with the frontal cortex of AD patients from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database. .. The search was conducted with the following keywords: (“Alzheimer’s disease” and “Expression profiling by array”), and the species was restricted as “Homo sapiens.” Four datasets (GSE5281, GSE131617, GSE48350, and GSE84422) from the platform of Affymetrix are used as experimental datasets, and another two datasets (GSE33000 and GSE44772) from the platform of Rosetta/Merck were used as validation datasets.



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    Image Search Results


    Information of gene-expression profile datasets associated with GBM.

    Journal: Scientific Reports

    Article Title: Discovery of key molecular signatures for diagnosis and therapies of glioblastoma by combining supervised and unsupervised learning approaches

    doi: 10.1038/s41598-024-79391-2

    Figure Lengend Snippet: Information of gene-expression profile datasets associated with GBM.

    Article Snippet: Total 10 microarray gene-expression profile datasets that contained GBM and control samples, were downloaded from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) database to explore GBM-causing key genes.

    Techniques: Control

    Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Study design flowchart. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure. DEcircRNAs, differentially expressed circRNAs; DEmiRNAs, differentially expressed miRNAs; DEmRNAs, differentially expressed mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of mRNAs for GSE103465. (A) Boxplot of GSE103465. (B) Volcano plots of DEmRNAs based on GSE103465. (C) Venn diagram of mRNAs for GeneCards and GSE103465, where the intersection section is predicted DEmRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of miRNAs for GSE121219. (A) Boxplot of GSE121219. (B) Volcano plots of DEmiRNAs based on GSE121219. (C) Venn diagram of miRNAs for miRDIP and GSE121219, where the intersection section is predicted DEmiRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Boxplots, volcano plots and Venn diagram of circRNAs for GSE147442. (A) Boxplot of GSE147442 after standardization. (B) Volcano plots of DEcircRNAs based on GSE147442. (C) Venn diagram of miRNAs for starBase 2.0 and GSE147442, where the intersection section is predicted DEcircRNAs asscociated with angiogenesis in RIF. circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: Figure 5 CircRNA-miRNA-mRNA regulatory network, which consists of 8 DEcircRNAs, 10 DEmiRNAs and 45 DERNAs. DEcircRNA, differentially expressed circular RNA; DEmiRNA, differentially expressed micro RNA; DERNA, differentially expressed RNA. Arrow-shape nodes: circRNAs, triangle nodes: miRNAs, ellipse-shaped nodes: mRNAs

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques:

    A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Journal: BMC Medical Genomics

    Article Title: Comprehensive analysis of circRNA-miRNA-mRNA network related to angiogenesis in recurrent implantation failure

    doi: 10.1186/s12920-024-01944-1

    Figure Lengend Snippet: A PPI network and circRNA–miRNA–hub gene regulatory subnetwork. (A) A PPI network of the fifty-five target genes associated with angiogenesis in RIF. (B) Six hub genes extracted by cytoHubba plug-in. (C) CircRNA–miRNA–hub gene regulatory subnetwork, consisting of 3 circRNAs, 3 miRNAs, and 3 mRNAs. PPI, protein–protein interaction; circRNA, circular RNA; miRNA, microRNA; RIF, recurrent implantation failure

    Article Snippet: CircRNA, miRNA and mRNA microarray expression profile datasets were selected from the National Center of Biotechnology Information Gene Expression Omnibus (NCBI) GEO ( https://www.ncbi.nlm.nih.gov/geo/ ).

    Techniques: